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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs61957447 chr13:52512492 C/T CUL7 chr6:43005355-43021683:- 1.13 7.17 1.65E-10 Box Plot
THYM rs61957449 chr13:52513731 T/C CUL7 chr6:43005355-43021683:- 1.13 7.17 1.65E-10 Box Plot
THYM rs61957453 chr13:52529571 T/C CUL7 chr6:43005355-43021683:- 1.14 7.22 1.31E-10 Box Plot
THYM rs62259081 chr3:67087852 G/A RXFP2 chr13:32313679-32377525:+ 0.6 7.23 1.19E-10 Box Plot
THYM rs62259089 chr3:67094691 C/T RXFP2 chr13:32313679-32377525:+ 0.6 7.22 1.29E-10 Box Plot
THYM rs62259102 chr3:67108118 A/G RXFP2 chr13:32313679-32377525:+ 0.6 7.23 1.19E-10 Box Plot
THYM rs625882 chr5:176535031 T/C LOC388955 chr2:63849182-63850159:- -0.84 -11.83 2.18E-20 Box Plot
THYM rs628506 chr5:176534423 A/C LOC388955 chr2:63849182-63850159:- -0.84 -11.83 2.18E-20 Box Plot
THYM rs649470 chr20:766224 A/G AQP2 chr12:50344524-50352664:+ -1.2 -7.1 2.25E-10 Box Plot
THYM rs655623 chr5:176534516 A/G LOC388955 chr2:63849182-63850159:- 0.83 11.6 6.75E-20 Box Plot
THYM rs6556308 chr5:176646701 T/C LOC388955 chr2:63849182-63850159:- -0.56 -7.99 3.19E-12 Box Plot
THYM rs6556309 chr5:176693835 C/T LOC388955 chr2:63849182-63850159:- 0.76 10.88 2.24E-18 Box Plot
THYM rs66525715 chr5:176740282 CT/C LOC388955 chr2:63849182-63850159:- 0.62 8.63 1.41E-13 Box Plot
THYM rs66634619 chr3:61859508 TA/T HNRNPCL1 chr1:12907261-12908578:- 0.54 7.7 1.26E-11 Box Plot
THYM rs667351 chr11:71869476 G/A SSX4 chrX:48242957-48252789:+ -0.69 -7.42 5.0E-11 Box Plot